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@@ -1386,7 +1386,6 @@
 # AZURE_OPENAI_API_VERSION: &#39;Azure OpenAI API Version Here if using Azure OpenAI Model&#39;
 # OPENAI_API_BASE_URL: &#39;LM base URL here if using Local or alternative api Endpoint&#39;
 </code></pre></div>
-<p>See the following links for tutorials on obtaining <a href="https://docs.anthropic.com/en/api/getting-started">Anthropic</a>, <a href="https://platform.openai.com/docs/quickstart/step-2-set-up-your-api-key">OpenAI</a>, and <a href="https://docs.github.com/en/authentication/keeping-your-account-and-data-secure/managing-your-personal-access-tokens">Github</a> tokens.</p>
 <div class="admonition tip">
 <p class="admonition-title">Models</p>
 <p>Some more information about the available models in our <a href="../../usage/usage_faq/">usage FAQ</a>.</p>

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@@ -4631,7 +4631,7 @@ Return the final value of the specified return type.</p>
                 <code>setup_args</code>
             </td>
             <td>
-                  <code>dict[str, Any]</code>
+                  <code>dict[str, <span title="typing.Any">Any</span>]</code>
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@@ -4647,7 +4647,7 @@ Return the final value of the specified return type.</p>
                 <code>env</code>
             </td>
             <td>
-                  <code>SWEEnv</code>
+                  <code><a class="autorefs autorefs-internal" title="sweagent.environment.swe_env.SWEEnv" href="../env/#sweagent.environment.swe_env.SWEEnv">SWEEnv</a></code>
             </td>
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                 <code>traj_dir</code>
             </td>
             <td>
-                  <code>Path | None</code>
+                  <code><span title="pathlib.Path">Path</span> | None</code>
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@@ -4713,7 +4713,7 @@ other values are for internal usage with subroutines.</p>
                 <code>init_model_stats</code>
             </td>
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                 <code>instance_args</code>
             </td>
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+                  <code>dict[str, <span title="typing.Any">Any</span>]</code>
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@@ -5494,7 +5494,7 @@ formatting the system message and adding demonstrations to the history.</p>
 
     <div class="doc doc-contents ">
             <p class="doc doc-class-bases">
-              Bases: <code>FlattenedAccess</code>, <code>FrozenSerializable</code></p>
+              Bases: <code><span title="simple_parsing.helpers.flatten.FlattenedAccess">FlattenedAccess</span></code>, <code><span title="simple_parsing.helpers.serialization.serializable.FrozenSerializable">FrozenSerializable</span></code></p>
 
 
         <p>Configure the agent's behaviour (templates, parse functions, blocklists, ...).</p>

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-              Bases: <code>FrozenSerializable</code></p>
+              Bases: <code><span title="simple_parsing.helpers.serialization.serializable.FrozenSerializable">FrozenSerializable</span></code></p>
 
 
         <p>Configure data sources and setup instructions for the environment in which we solve the tasks.</p>
@@ -2334,7 +2334,7 @@ lifecycle, in particular to connect SWE-agent to a new interface (like a GUI).</
 
     <div class="doc doc-contents ">
             <p class="doc doc-class-bases">
-              Bases: <code>Env</code></p>
+              Bases: <code><span title="gymnasium.Env">Env</span></code></p>
 
 
         <p>Gym environment for SWE-bench. This class should handle all communication with the docker container.</p>
@@ -6604,7 +6604,7 @@ and parent PIDs</p>
                 <code>path</code>
             </td>
             <td>
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+                  <code>str | <span title="pathlib.PurePath">PurePath</span></code>
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@@ -7013,7 +7013,7 @@ this prepares the container for taking another shot at the same instance.</p>
                 <code>script_path</code>
             </td>
             <td>
-                  <code>Path</code>
+                  <code><span title="pathlib.Path">Path</span></code>
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@@ -7162,7 +7162,7 @@ this prepares the container for taking another shot at the same instance.</p>
           </tr>
           <tr class="doc-section-item">
 <td><code>info</code></td>            <td>
-                  <code>AgentInfo</code>
+                  <code><span title="sweagent.types.AgentInfo">AgentInfo</span></code>
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                 <code>read_method</code>
             </td>
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+                  <code><span title="typing.Callable">Callable</span>[[str], str]</code>
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@@ -3246,7 +3246,7 @@ The first line is line 1.</p>
                 <code>container</code>
             </td>
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-                  <code>Container</code>
+                  <code><span title="docker.models.containers.Container">Container</span></code>
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@@ -3560,7 +3560,7 @@ The first line is line 1.</p>
                 <code>api</code>
             </td>
             <td>
-                  <code>GhApi</code>
+                  <code><span title="ghapi.all.GhApi">GhApi</span></code>
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@@ -3953,7 +3953,7 @@ for return format</p>
       <tbody>
           <tr class="doc-section-item">
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+                  <code>list[dict[str, <span title="typing.Any">Any</span>]]</code>
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@@ -4442,7 +4442,7 @@ Paths to issues or PRs will also match this pattern.</p>
       <tbody>
           <tr class="doc-section-item">
             <td>
-                  <code>InvalidGithubURL</code>
+                  <code><span title="sweagent.environment.utils.InvalidGithubURL">InvalidGithubURL</span></code>
             </td>
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@@ -4551,7 +4551,7 @@ Paths to issues or PRs will also match this pattern.</p>
       <tbody>
           <tr class="doc-section-item">
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+                  <code><span title="sweagent.environment.utils.InvalidGithubURL">InvalidGithubURL</span></code>
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@@ -4632,7 +4632,7 @@ This function uses a file descriptor to read data from the subprocess in a non-b
                 <code>session</code>
             </td>
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+                  <code><span title="subprocess.Popen">Popen</span></code>
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                 <code>container</code>
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+                  <code><span title="subprocess.Popen">Popen</span></code>
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                 <code>pid_func</code>
             </td>
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+                  <code><span title="typing.Callable">Callable</span></code>
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@@ -5138,7 +5138,7 @@ has not been thoroughly tested.</p>
                 <code>container</code>
             </td>
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+                  <code><span title="subprocess.Popen">Popen</span></code>
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+              Bases: <code><a class="autorefs autorefs-internal" title="sweagent.agent.models.BaseModel" href="#sweagent.agent.models.BaseModel">BaseModel</a></code></p>
 
 
 
@@ -2770,7 +2770,7 @@ float: The cost of the response.</p>
 
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+              Bases: <code><a class="autorefs autorefs-internal" title="sweagent.agent.models.BaseModel" href="#sweagent.agent.models.BaseModel">BaseModel</a></code></p>
 
 
 
@@ -3356,7 +3356,7 @@ float: The cost of the response.</p>
 
     <div class="doc doc-contents ">
             <p class="doc doc-class-bases">
-              Bases: <code>HumanModel</code></p>
+              Bases: <code><a class="autorefs autorefs-internal" title="sweagent.agent.models.HumanModel" href="#sweagent.agent.models.HumanModel">HumanModel</a></code></p>
 
 
 
@@ -3495,7 +3495,7 @@ float: The cost of the response.</p>
 
     <div class="doc doc-contents ">
             <p class="doc doc-class-bases">
-              Bases: <code>BaseModel</code></p>
+              Bases: <code><a class="autorefs autorefs-internal" title="sweagent.agent.models.BaseModel" href="#sweagent.agent.models.BaseModel">BaseModel</a></code></p>
 
 
 
@@ -3622,7 +3622,7 @@ float: The cost of the response.</p>
 
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             <p class="doc doc-class-bases">
-              Bases: <code>FrozenSerializable</code></p>
+              Bases: <code><span title="simple_parsing.helpers.serialization.serializable.FrozenSerializable">FrozenSerializable</span></code></p>
 
 
         <p>Arguments configuring the model and its behavior.</p>
@@ -3705,7 +3705,7 @@ float: The cost of the response.</p>
 
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             <p class="doc doc-class-bases">
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     <div class="doc doc-contents ">
             <p class="doc doc-class-bases">
-              Bases: <code>BaseModel</code></p>
+              Bases: <code><a class="autorefs autorefs-internal" title="sweagent.agent.models.BaseModel" href="#sweagent.agent.models.BaseModel">BaseModel</a></code></p>
 
 
 

usage/benchmarking/index.html

@@ -15,8 +15,8 @@
         <link rel="next" href="../../config/config/">
       
       
-      <link rel="icon" href="../../assets/images/favicon.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.41">
+      <link rel="icon" href="../../assets/swe-agent.svg">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.42">
     
     
       

usage/cl_tutorial/index.html

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         <link rel="next" href="../enigma/">
       
       
-      <link rel="icon" href="../../assets/images/favicon.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.41">
+      <link rel="icon" href="../../assets/swe-agent.svg">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.42">
     
     
       

usage/coding_challenges/index.html

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-      <link rel="icon" href="../../assets/images/favicon.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.41">
+      <link rel="icon" href="../../assets/swe-agent.svg">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.42">
     
     
       

usage/enigma/index.html

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         <link rel="next" href="../coding_challenges/">
       
       
-      <link rel="icon" href="../../assets/images/favicon.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.41">
+      <link rel="icon" href="../../assets/swe-agent.svg">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.42">
     
     
       
@@ -1464,8 +1464,8 @@ We will first need to clone <a href="https://github.com/NYU-LLM-CTF/LLM_CTF_Data
 <span class="w">  </span>--model_name<span class="w"> </span>gpt4<span class="w"> </span><span class="se">\</span>
 <span class="w">  </span>--ctf<span class="w"> </span><span class="se">\</span>
 <span class="w">  </span>--image_name<span class="w"> </span>sweagent/enigma:latest<span class="w"> </span><span class="se">\</span>
-<span class="w">  </span>--data_path<span class="w"> </span>../LLM_CTF_Database/2018/CSAW-Finals/misc/leaked_flag/challenge.json<span class="w"> </span><span class="se">\</span>
-<span class="w">  </span>--repo_path<span class="w"> </span>../LLM_CTF_Database/2018/CSAW-Finals/misc/leaked_flag<span class="w"> </span><span class="se">\</span>
+<span class="w">  </span>--data_path<span class="w"> </span>../NYU_CTF_Bench/test/2018/CSAW-Finals/misc/leaked_flag/challenge.json<span class="w"> </span><span class="se">\</span>
+<span class="w">  </span>--repo_path<span class="w"> </span>../NYU_CTF_Bench/test/2018/CSAW-Finals/misc/leaked_flag/<span class="w"> </span><span class="se">\</span>
 <span class="w">  </span>--config_file<span class="w"> </span>config/default_ctf.yaml<span class="w"> </span><span class="se">\</span>
 <span class="w">  </span>--per_instance_cost_limit<span class="w"> </span><span class="m">2</span>.00
 </code></pre></div>

usage/index.html

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-      <link rel="icon" href="../assets/images/favicon.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.41">
+      <link rel="icon" href="../assets/swe-agent.svg">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.42">
     
     
       

usage/inspector/index.html

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-      <link rel="icon" href="../../assets/images/favicon.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.41">
+      <link rel="icon" href="../../assets/swe-agent.svg">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.42">
     
     
       

usage/leetcode_example/index.html

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-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.41">
+      <link rel="icon" href="../../assets/swe-agent.svg">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.42">
     
     
       

usage/trajectories/index.html

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-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.41">
+      <link rel="icon" href="../../assets/swe-agent.svg">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.42">
     
     
       

usage/usage_faq/index.html

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-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.41">
+      <link rel="icon" href="../../assets/swe-agent.svg">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.42">
     
     
       

usage/web_ui/index.html

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-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.41">
+      <link rel="icon" href="../../assets/swe-agent.svg">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.42">